Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001724annotation not available (173 aa)    
Predicted Functional Partners:
RPAP2
RNA polymerase II associated protein 2.
   
   0.974
NOP58
NOP58 ribonucleoprotein.
   
 
 0.970
RUVBL2
RuvB like AAA ATPase 2.
    
 0.916
CCDC171
Coiled-coil domain containing 171.
    
  0.879
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.729
PALMD
Palmdelphin.
    
 
 0.660
ENSSARP00000005263
annotation not available
      
 0.658
ENSSARP00000011203
annotation not available
    
 0.634
MIPOL1
Mirror-image polydactyly 1.
   
    0.591
ENSSARP00000006159
annotation not available
      
 0.561
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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