Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDHD1DDHD domain containing 1. (621 aa)    
Predicted Functional Partners:
DDHD2
DDHD domain containing 2.
     
 0.918
SEC31A
SEC31 homolog A, COPII coat complex component.
    
 0.740
SEC31B
SEC31 homolog B, COPII coat complex component.
    
 0.740
SEC23A
Sec23 homolog A, coat complex II component.
    
 0.737
ENSSARP00000004860
annotation not available
    
 0.737
ENSSARP00000006484
annotation not available
     
 0.694
IL12B
Interleukin 12B.
      
 0.633
ANKRD40
Ankyrin repeat domain 40.
    
 0.626
ENSSARP00000011089
annotation not available
      
 0.625
SEC24A
SEC24 homolog A, COPII coat complex component.
   
 0.597
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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