STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDHD1DDHD domain containing 1. (621 aa)    
Predicted Functional Partners:
DDHD2
DDHD domain containing 2.
   
 
0.954
SEC31A
SEC31 homolog A, COPII coat complex component.
    
 0.700
SEC31B
SEC31 homolog B, COPII coat complex component.
    
 0.700
GBA2
Glucosylceramidase beta 2.
    
 
 0.697
ENSSARP00000006484
annotation not available
   
 
0.690
SEC23A
Sec23 homolog A, coat complex II component.
   
 0.687
ENSSARP00000004860
annotation not available
   
 0.687
ENSSARP00000011089
annotation not available
      
 0.677
ANKRD40
Ankyrin repeat domain 40.
    
 0.675
ENSSARP00000009082
annotation not available
   
  
 0.607
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.