ENSSARP00000001730 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSARP00000001730

annotation not available (189 aa)

Predicted Functional Partners:

IL18R1

0.978

ENSSARP00000003676

0.941

ENSSARP00000006670

0.874

ENSSARP00000011345

0.869

ENSSARP00000007120

0.845

ENSSARP00000002254

0.838

LOC105942813

0.838

ENSSARP00000010060

0.838

ENSSARP00000005524

0.837

ENSSARP00000008830

0.832

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001730	ENSSARP00000002254	ENSSARP00000001730	ENSSARP00000002254	annotation not available	annotation not available	0.838
ENSSARP00000001730	ENSSARP00000003676	ENSSARP00000001730	ENSSARP00000003676	annotation not available	annotation not available	0.941
ENSSARP00000001730	ENSSARP00000005524	ENSSARP00000001730	ENSSARP00000005524	annotation not available	annotation not available	0.837
ENSSARP00000001730	ENSSARP00000006670	ENSSARP00000001730	ENSSARP00000006670	annotation not available	annotation not available	0.874
ENSSARP00000001730	ENSSARP00000007120	ENSSARP00000001730	ENSSARP00000007120	annotation not available	annotation not available	0.845
ENSSARP00000001730	ENSSARP00000008830	ENSSARP00000001730	ENSSARP00000008830	annotation not available	annotation not available	0.832
ENSSARP00000001730	ENSSARP00000010060	ENSSARP00000001730	ENSSARP00000010060	annotation not available	annotation not available	0.838
ENSSARP00000001730	ENSSARP00000011345	ENSSARP00000001730	ENSSARP00000011345	annotation not available	annotation not available	0.869
ENSSARP00000001730	IL18R1	ENSSARP00000001730	ENSSARP00000008442	annotation not available	Interleukin 18 receptor 1.	0.978
ENSSARP00000001730	LOC105942813	ENSSARP00000001730	ENSSARP00000005539	annotation not available	Caspase-13-like.	0.838
ENSSARP00000002254	ENSSARP00000001730	ENSSARP00000002254	ENSSARP00000001730	annotation not available	annotation not available	0.838
ENSSARP00000002254	ENSSARP00000003676	ENSSARP00000002254	ENSSARP00000003676	annotation not available	annotation not available	0.991
ENSSARP00000002254	ENSSARP00000005524	ENSSARP00000002254	ENSSARP00000005524	annotation not available	annotation not available	0.739
ENSSARP00000002254	ENSSARP00000006670	ENSSARP00000002254	ENSSARP00000006670	annotation not available	annotation not available	0.942
ENSSARP00000002254	ENSSARP00000007120	ENSSARP00000002254	ENSSARP00000007120	annotation not available	annotation not available	0.918
ENSSARP00000003676	ENSSARP00000001730	ENSSARP00000003676	ENSSARP00000001730	annotation not available	annotation not available	0.941
ENSSARP00000003676	ENSSARP00000002254	ENSSARP00000003676	ENSSARP00000002254	annotation not available	annotation not available	0.991
ENSSARP00000003676	ENSSARP00000005524	ENSSARP00000003676	ENSSARP00000005524	annotation not available	annotation not available	0.914
ENSSARP00000003676	ENSSARP00000006670	ENSSARP00000003676	ENSSARP00000006670	annotation not available	annotation not available	0.857
ENSSARP00000003676	ENSSARP00000007120	ENSSARP00000003676	ENSSARP00000007120	annotation not available	annotation not available	0.639