ENSSARP00000001735 protein (Sorex araneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSSARP00000001735

annotation not available (125 aa)

Predicted Functional Partners:

JCHAIN

0.691

ENSSARP00000007959

0.609

PIGR

0.594

ENSSARP00000006489

0.591

ENSSARP00000001038

0.589

ENSSARP00000012325

0.564

ENSSARP00000003529

0.510

ENSSARP00000008071

0.441

ENSSARP00000003104

0.405

ENSSARP00000004842

0.405

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001038	ENSSARP00000001735	ENSSARP00000001038	ENSSARP00000001735	annotation not available	annotation not available	0.589
ENSSARP00000001038	ENSSARP00000003104	ENSSARP00000001038	ENSSARP00000003104	annotation not available	annotation not available	0.667
ENSSARP00000001038	ENSSARP00000003529	ENSSARP00000001038	ENSSARP00000003529	annotation not available	annotation not available	0.667
ENSSARP00000001038	ENSSARP00000004842	ENSSARP00000001038	ENSSARP00000004842	annotation not available	annotation not available	0.667
ENSSARP00000001038	ENSSARP00000006489	ENSSARP00000001038	ENSSARP00000006489	annotation not available	annotation not available	0.993
ENSSARP00000001038	ENSSARP00000007959	ENSSARP00000001038	ENSSARP00000007959	annotation not available	annotation not available	0.999
ENSSARP00000001038	ENSSARP00000008071	ENSSARP00000001038	ENSSARP00000008071	annotation not available	annotation not available	0.566
ENSSARP00000001038	ENSSARP00000012325	ENSSARP00000001038	ENSSARP00000012325	annotation not available	annotation not available	0.921
ENSSARP00000001038	JCHAIN	ENSSARP00000001038	ENSSARP00000007260	annotation not available	Joining chain of multimeric IgA and IgM.	0.962
ENSSARP00000001038	PIGR	ENSSARP00000001038	ENSSARP00000005783	annotation not available	Polymeric immunoglobulin receptor.	0.945
ENSSARP00000001735	ENSSARP00000001038	ENSSARP00000001735	ENSSARP00000001038	annotation not available	annotation not available	0.589
ENSSARP00000001735	ENSSARP00000003104	ENSSARP00000001735	ENSSARP00000003104	annotation not available	annotation not available	0.405
ENSSARP00000001735	ENSSARP00000003529	ENSSARP00000001735	ENSSARP00000003529	annotation not available	annotation not available	0.510
ENSSARP00000001735	ENSSARP00000004842	ENSSARP00000001735	ENSSARP00000004842	annotation not available	annotation not available	0.405
ENSSARP00000001735	ENSSARP00000006489	ENSSARP00000001735	ENSSARP00000006489	annotation not available	annotation not available	0.591
ENSSARP00000001735	ENSSARP00000007959	ENSSARP00000001735	ENSSARP00000007959	annotation not available	annotation not available	0.609
ENSSARP00000001735	ENSSARP00000008071	ENSSARP00000001735	ENSSARP00000008071	annotation not available	annotation not available	0.441
ENSSARP00000001735	ENSSARP00000012325	ENSSARP00000001735	ENSSARP00000012325	annotation not available	annotation not available	0.564
ENSSARP00000001735	JCHAIN	ENSSARP00000001735	ENSSARP00000007260	annotation not available	Joining chain of multimeric IgA and IgM.	0.691
ENSSARP00000001735	PIGR	ENSSARP00000001735	ENSSARP00000005783	annotation not available	Polymeric immunoglobulin receptor.	0.594