Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LIN7CLin-7 homolog C, crumbs cell polarity complex component. (197 aa)    
Predicted Functional Partners:
MPP7
Membrane palmitoylated protein 7.
    
 0.981
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.975
DLG2
Discs large MAGUK scaffold protein 2.
   
 0.964
APBA1
Amyloid beta precursor protein binding family A member 1.
    
 0.964
DLG1
Discs large MAGUK scaffold protein 1.
   
 0.964
MPP3
Membrane palmitoylated protein 3.
    
 0.960
MPP5
Membrane palmitoylated protein 5.
    
 0.956
MPP1
Membrane palmitoylated protein 1.
    
 0.944
MPP6
Membrane palmitoylated protein 6.
    
 0.926
LIN7B
Lin-7 homolog B, crumbs cell polarity complex component.
     
  0.917
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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