STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HORMAD1HORMA domain containing 1. (367 aa)    
Predicted Functional Partners:
SPO11
SPO11 initiator of meiotic double stranded breaks.
   
  
 0.994
SYCP3
Synaptonemal complex protein 3.
   
 
 0.926
ENSSARP00000008313
annotation not available
   
 
 0.883
SYCE1
Synaptonemal complex central element protein 1.
      
 0.837
REC8
REC8 meiotic recombination protein.
   
 
 0.828
ENSSARP00000008539
annotation not available
      
 0.763
STAG3
Stromal antigen 3.
      
 0.759
SMC3
Structural maintenance of chromosomes 3.
    
 
 0.751
TOPBP1
DNA topoisomerase II binding protein 1.
      
 0.713
ENSSARP00000000151
annotation not available
      
 0.688
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.