STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDNFBrain derived neurotrophic factor. (254 aa)    
Predicted Functional Partners:
NTRK2
Neurotrophic receptor tyrosine kinase 2.
   
 0.993
NTF4
Neurotrophin 4.
    
0.970
CNTF
Ciliary neurotrophic factor.
      
 0.959
ENSSARP00000011021
annotation not available
   
 0.945
PDGFRA
Platelet derived growth factor receptor alpha.
     
 0.921
ERBB4
Erb-b2 receptor tyrosine kinase 4.
     
 0.919
SORT1
Sortilin 1.
    
 
 0.912
NGF
Nerve growth factor.
    
0.895
MECP2
methyl-CpG binding protein 2.
    
 0.885
EPHA2
EPH receptor A2.
    
 0.880
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.