Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101556387Hemoglobin subunit beta. (143 aa)    
Predicted Functional Partners:
ENSSARP00000000868
annotation not available
    
 0.926
ENSSARP00000006258
annotation not available
   
 0.924
HBM
Hemoglobin subunit mu.
   
 0.924
ENSSARP00000013053
annotation not available
   
 0.924
ENSSARP00000000797
annotation not available
   
 0.844
HEATR1
HEAT repeat containing 1.
    
  0.734
APOB
Apolipoprotein B.
    
 0.680
RPS7
Ribosomal protein S7.
    
  0.660
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
    
 0.625
CSNK2B
Casein kinase 2 beta.
    
  0.593
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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