STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101556387Hemoglobin subunit beta. (143 aa)    
Predicted Functional Partners:
ENSSARP00000000868
annotation not available
    
 0.942
ENSSARP00000006258
annotation not available
  
0.904
ENSSARP00000013053
annotation not available
  
0.904
HBM
Hemoglobin subunit mu.
   
0.900
CYB5R4
Cytochrome b5 reductase 4.
   
 0.778
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.755
ENSSARP00000000797
annotation not available
   
 0.733
APOB
Apolipoprotein B.
     
 0.634
EIF3J
Eukaryotic translation initiation factor 3 subunit J.
    
 
 0.508
ENSSARP00000007824
annotation not available
    
 0.499
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.