Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001773annotation not available (138 aa)    
Predicted Functional Partners:
ATP1B3
ATPase Na+/K+ transporting subunit beta 3.
    
   0.813
VAMP8
Vesicle associated membrane protein 8.
    
   0.808
ENSSARP00000010466
annotation not available
      
 0.654
SH3RF1
SH3 domain containing ring finger 1.
      
 0.610
TMEM170B
Transmembrane protein 170B.
      
 0.600
WDR36
WD repeat domain 36.
      
 0.583
TMEM168
Transmembrane protein 168.
      
 0.556
ENSSARP00000005691
annotation not available
      
 0.553
ENSSARP00000003968
annotation not available
      
 0.552
ATP5MC2
ATP synthase membrane subunit c locus 2.
      
 0.550
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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