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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC18A2Solute carrier family 18 member A2. (476 aa)    
Predicted Functional Partners:
SYT1
Synaptotagmin 1.
     
 0.929
ENSSARP00000000628
annotation not available
   
 
 0.918
ENSSARP00000002993
annotation not available
     
 0.763
DDC
Dopa decarboxylase.
   
 
 0.737
TNNI3
Troponin I3, cardiac type.
      
 0.724
SLC6A4
Solute carrier family 6 member 4.
   
 
 0.718
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.709
SYT6
Synaptotagmin 6.
     
 0.699
SNAP25
Synaptosome associated protein 25.
     
 0.693
ENSSARP00000000608
annotation not available
     
 0.685
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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