Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BTAF1B-TFIID TATA-box binding protein associated factor 1. (1845 aa)    
Predicted Functional Partners:
ENSSARP00000005139
annotation not available
    
 
 0.938
PHF12
PHD finger protein 12.
   
 
 0.923
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 
 0.922
ENSSARP00000002266
annotation not available
   
 
 0.913
ENSSARP00000009762
annotation not available
    
 
 0.910
ENSSARP00000001737
annotation not available
    
 
 0.880
ENSSARP00000001916
annotation not available
    
 
 0.880
TBPL2
TATA-box binding protein like 2.
    
 
 0.880
KAT2B
Lysine acetyltransferase 2B.
    
 
 0.862
TRRAP
Transformation/transcription domain associated protein.
   
   0.858
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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