STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPEB3Cytoplasmic polyadenylation element binding protein 3. (363 aa)    
Predicted Functional Partners:
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 0.902
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.892
PLK1
Polo like kinase 1.
    
 0.883
CDK1
Cyclin dependent kinase 1.
    
 0.880
ENSSARP00000011438
annotation not available
    
  0.879
CNOT1
CCR4-NOT transcription complex subunit 1.
    
 0.873
CNOT10
CCR4-NOT transcription complex subunit 10.
    
  0.872
CNOT11
CCR4-NOT transcription complex subunit 11.
    
  0.872
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.871
ENSSARP00000005120
annotation not available
    
  0.868
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.