Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPEB3Cytoplasmic polyadenylation element binding protein 3. (363 aa)    
Predicted Functional Partners:
ENSSARP00000009533
annotation not available
  
 
0.999
CPEB4
Cytoplasmic polyadenylation element binding protein 4.
  
 
0.998
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.941
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.932
PLK1
Polo like kinase 1.
    
 0.930
ENSSARP00000007631
annotation not available
    
 0.928
ENSSARP00000011438
annotation not available
    
 0.928
CNOT10
CCR4-NOT transcription complex subunit 10.
    
 0.927
CNOT11
CCR4-NOT transcription complex subunit 11.
    
  0.927
CNOT2
CCR4-NOT transcription complex subunit 2.
     
 0.926
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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