Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERPINI1Serpin family I member 1. (385 aa)    
Predicted Functional Partners:
HABP2
Hyaluronan binding protein 2.
  
 0.761
ENSSARP00000012144
annotation not available
   
 0.736
PLG
Plasminogen.
   
 0.656
ENSSARP00000005002
annotation not available
   
 0.656
ENSSARP00000005012
annotation not available
   
 0.656
VTN
Vitronectin.
   
 0.645
PLAU
Plasminogen activator, urokinase.
   
 0.612
PDCD10
Programmed cell death 10.
      
 0.608
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit.
   
  
 0.603
ENSSARP00000007824
annotation not available
  
 0.596
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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