STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIA1TIA1 cytotoxic granule associated RNA binding protein. (345 aa)    
Predicted Functional Partners:
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.864
DCP1A
Decapping mRNA 1A.
   
 
 0.863
PCBP2
poly(rC) binding protein 2.
   
 0.851
ENSSARP00000012242
annotation not available
   
 0.844
CSTF3
Cleavage stimulation factor subunit 3.
  
 0.843
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 0.832
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.814
ENSSARP00000001802
annotation not available
   
 0.809
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.803
ENSSARP00000009876
annotation not available
   
 0.803
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.