Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001822annotation not available (222 aa)    
Predicted Functional Partners:
TFAP2B
Transcription factor AP-2 beta.
   
 0.940
KCTD1
Potassium channel tetramerization domain containing 1.
    
 0.940
ESR1
Estrogen receptor 1.
    
 0.917
TFAP2D
Transcription factor AP-2 delta.
   
  0.917
ENSSARP00000008652
annotation not available
   
 0.903
PRDM1
PR/SET domain 1.
     
 0.897
MYC
MYC proto-oncogene, bHLH transcription factor.
    
 0.859
ENSSARP00000012084
annotation not available
    
 0.798
KDM5B
Lysine demethylase 5B.
    
 0.785
BMP4
Bone morphogenetic protein 4.
   
 
 0.773
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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