Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC59Leucine rich repeat containing 59. (307 aa)    
Predicted Functional Partners:
SND1
Staphylococcal nuclease and tudor domain containing 1.
   
 
 0.959
ENSSARP00000009389
annotation not available
    
   0.908
ENSSARP00000007146
annotation not available
    
   0.843
ENSSARP00000011404
annotation not available
    
   0.843
DHX9
DExH-box helicase 9.
    
  0.820
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
    
 
 0.813
ILF3
Interleukin enhancer binding factor 3.
    
   0.812
SEC61B
SEC61 translocon beta subunit.
    
 
 0.769
ENSSARP00000008849
annotation not available
    
   0.765
SEC63
SEC63 homolog, protein translocation regulator.
   
   0.668
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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