Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001832annotation not available (614 aa)    
Predicted Functional Partners:
TWISTNB
TWIST neighbor.
   
 0.995
ENSSARP00000002940
annotation not available
   
 0.993
ENSSARP00000007317
annotation not available
   
 0.992
ENSSARP00000008863
annotation not available
   
 0.990
ZNRD1
Zinc ribbon domain containing 1.
   
 0.978
ENSSARP00000001402
annotation not available
   
 0.973
POLR2L
RNA polymerase II subunit L.
    
 0.960
ENSSARP00000007865
annotation not available
   
 0.957
POLR1D
RNA polymerase I and III subunit D.
   
 0.941
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A.
    
 0.895
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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