ENSSARP00000001834 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSARP00000001834

annotation not available (378 aa)

Predicted Functional Partners:

IP6K1

0.631

GJB5

0.624

MAGEB18

0.604

KCNE2

0.592

ENSSARP00000002739

0.581

ENSSARP00000005021

0.569

ENSSARP00000012770

0.567

ENSSARP00000007081

0.563

ENSSARP00000011141

0.529

LRRC8B

0.520

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001834	ENSSARP00000002739	ENSSARP00000001834	ENSSARP00000002739	annotation not available	annotation not available	0.581
ENSSARP00000001834	ENSSARP00000005021	ENSSARP00000001834	ENSSARP00000005021	annotation not available	annotation not available	0.569
ENSSARP00000001834	ENSSARP00000007081	ENSSARP00000001834	ENSSARP00000007081	annotation not available	annotation not available	0.563
ENSSARP00000001834	ENSSARP00000011141	ENSSARP00000001834	ENSSARP00000011141	annotation not available	annotation not available	0.529
ENSSARP00000001834	ENSSARP00000012770	ENSSARP00000001834	ENSSARP00000012770	annotation not available	annotation not available	0.567
ENSSARP00000001834	GJB5	ENSSARP00000001834	ENSSARP00000006086	annotation not available	Gap junction protein beta 5.	0.624
ENSSARP00000001834	IP6K1	ENSSARP00000001834	ENSSARP00000010015	annotation not available	Inositol hexakisphosphate kinase 1.	0.631
ENSSARP00000001834	KCNE2	ENSSARP00000001834	ENSSARP00000012592	annotation not available	Potassium voltage-gated channel subfamily E regulatory subunit 2.	0.592
ENSSARP00000001834	LRRC8B	ENSSARP00000001834	ENSSARP00000005829	annotation not available	Leucine rich repeat containing 8 VRAC subunit B.	0.520
ENSSARP00000001834	MAGEB18	ENSSARP00000001834	ENSSARP00000004899	annotation not available	MAGE family member B18.	0.604
ENSSARP00000002739	ENSSARP00000001834	ENSSARP00000002739	ENSSARP00000001834	annotation not available	annotation not available	0.581
ENSSARP00000005021	ENSSARP00000001834	ENSSARP00000005021	ENSSARP00000001834	annotation not available	annotation not available	0.569
ENSSARP00000005021	MAGEB18	ENSSARP00000005021	ENSSARP00000004899	annotation not available	MAGE family member B18.	0.552
ENSSARP00000007081	ENSSARP00000001834	ENSSARP00000007081	ENSSARP00000001834	annotation not available	annotation not available	0.563
ENSSARP00000007081	KCNE2	ENSSARP00000007081	ENSSARP00000012592	annotation not available	Potassium voltage-gated channel subfamily E regulatory subunit 2.	0.497
ENSSARP00000007081	MAGEB18	ENSSARP00000007081	ENSSARP00000004899	annotation not available	MAGE family member B18.	0.459
ENSSARP00000011141	ENSSARP00000001834	ENSSARP00000011141	ENSSARP00000001834	annotation not available	annotation not available	0.529
ENSSARP00000012770	ENSSARP00000001834	ENSSARP00000012770	ENSSARP00000001834	annotation not available	annotation not available	0.567
ENSSARP00000012770	MAGEB18	ENSSARP00000012770	ENSSARP00000004899	annotation not available	MAGE family member B18.	0.465
GJB5	ENSSARP00000001834	ENSSARP00000006086	ENSSARP00000001834	Gap junction protein beta 5.	annotation not available	0.624