Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001848annotation not available (937 aa)    
Predicted Functional Partners:
ENSSARP00000004844
annotation not available
    
 
 0.941
PDHB
Pyruvate dehydrogenase E1 beta subunit.
   
   0.891
SUCLG2
succinate-CoA ligase GDP-forming beta subunit.
  
   0.884
GRPEL2
GrpE like 2, mitochondrial.
  
 
 0.879
ENSSARP00000001368
annotation not available
    
 
 0.871
DLD
Dihydrolipoamide dehydrogenase.
   
 
 0.864
ENSSARP00000006032
annotation not available
   
 
 0.845
XPNPEP2
X-prolyl aminopeptidase 2.
   
 
 0.845
ENSSARP00000007384
annotation not available
    
   0.829
ENSSARP00000008061
annotation not available
    
   0.829
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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