STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM1PDZ and LIM domain 1. (328 aa)    
Predicted Functional Partners:
ENSSARP00000003024
annotation not available
 
   
0.940
ENSSARP00000004743
annotation not available
   
 0.872
ENSSARP00000007743
annotation not available
    
 0.872
ENSSARP00000007674
annotation not available
    
 0.827
ENSSARP00000002916
annotation not available
   
 0.808
ENSSARP00000007075
annotation not available
    
 0.802
RAC1
Rac family small GTPase 1.
    
 0.782
MYO3A
Myosin IIIA.
    
  0.762
MYO3B
Myosin IIIB.
    
  0.762
ENSSARP00000006103
annotation not available
   
 0.753
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.