STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPS1Transcriptional repressor GATA binding 1. (1140 aa)    
Predicted Functional Partners:
NFYB
Nuclear transcription factor Y subunit beta.
    
 
 0.932
FOXA1
Forkhead box A1.
    
 0.929
ARID4B
AT-rich interaction domain 4B.
   
 0.919
ARID4A
AT-rich interaction domain 4A.
   
 0.918
SRF
Serum response factor.
    
 0.902
SIN3A
SIN3 transcription regulator family member A.
    
 0.858
ENSSARP00000013068
annotation not available
    
 0.858
PBRM1
Polybromo 1.
   
 0.851
RUNX2
RUNX family transcription factor 2.
    
 0.830
RUNX1
RUNX family transcription factor 1.
    
 0.830
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.