Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDH2Cadherin 2. (905 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.998
CTNND1
Catenin delta 1.
    
 0.996
JUP
Junction plakoglobin.
    
 0.996
ARVCF
ARVCF delta catenin family member.
    
 0.973
CTNNA2
Catenin alpha 2.
    
 0.953
CTNNA1
Catenin alpha 1.
    
 0.953
PTPN1
Protein tyrosine phosphatase non-receptor type 1.
    
 
 0.947
ENSSARP00000006748
annotation not available
    
 0.944
ENSSARP00000010739
annotation not available
    
 0.943
CDH11
Cadherin 11.
   
 0.942
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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