STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC8Tetratricopeptide repeat domain 8. (492 aa)    
Predicted Functional Partners:
BBS7
Bardet-Biedl syndrome 7.
  
 0.999
BBS2
Bardet-Biedl syndrome 2.
  
 0.999
BBS9
Bardet-Biedl syndrome 9.
    
 0.999
BBS5
Bardet-Biedl syndrome 5.
  
 0.999
BBS4
Bardet-Biedl syndrome 4.
   
0.999
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.967
KLHL41
Kelch like family member 41.
   
 0.967
KIFC2
Kinesin family member C2.
    
 0.967
ENSSARP00000009278
annotation not available
    
 0.967
LZTFL1
Leucine zipper transcription factor like 1.
  
 0.950
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.