Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PMP2Peripheral myelin protein 2. (132 aa)    
Predicted Functional Partners:
ADIPOQ
Adiponectin, C1Q and collagen domain containing.
   
 
 0.808
PPARG
Peroxisome proliferator activated receptor gamma.
   
 0.649
ENSSARP00000009042
annotation not available
   
 
 0.625
ENSSARP00000001040
annotation not available
   
 0.600
ENSSARP00000002084
annotation not available
    
 0.592
ACADVL
acyl-CoA dehydrogenase very long chain.
    
 0.588
ENSSARP00000006363
annotation not available
      
 0.558
ECH1
enoyl-CoA hydratase 1.
      
 0.557
NCMAP
Non-compact myelin associated protein.
      
 0.554
ENSSARP00000006607
annotation not available
      
 0.550
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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