STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM27Tripartite motif containing 27. (512 aa)    
Predicted Functional Partners:
ENSSARP00000012625
annotation not available
    
 0.955
SNX27
Sorting nexin 27.
    
 0.949
ENSSARP00000005021
annotation not available
     
 0.931
SNX2
Sorting nexin 2.
     
 0.909
SNX1
Sorting nexin 1.
     
 0.894
ENSSARP00000011942
annotation not available
    
  0.877
SNX8
Sorting nexin 8.
    
 0.872
VPS26B
VPS26, retromer complex component B.
    
  0.868
SNX3
Sorting nexin 3.
    
 0.862
VPS26A
VPS26, retromer complex component A.
    
  0.860
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.