Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GGCTGamma-glutamylcyclotransferase. (188 aa)    
Predicted Functional Partners:
GGT7
Gamma-glutamyltransferase 7.
     
 0.967
GGT6
Gamma-glutamyltransferase 6.
     
 0.949
CHAC2
ChaC cation transport regulator homolog 2.
     
 0.934
GCLC
Glutamate-cysteine ligase catalytic subunit.
     
 0.914
OPLAH
5-oxoprolinase, ATP-hydrolysing.
     
 0.909
GCLM
Glutamate-cysteine ligase modifier subunit.
     
 0.903
ANPEP
Alanyl aminopeptidase, membrane.
     
  0.900
KYAT3
Kynurenine aminotransferase 3.
     
 0.878
GOT1
Glutamic-oxaloacetic transaminase 1.
     
 0.805
CDO1
Cysteine dioxygenase type 1.
     
 0.803
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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