Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001877annotation not available (226 aa)    
Predicted Functional Partners:
CCT7
Chaperonin containing TCP1 subunit 7.
  
 0.950
ENSSARP00000002031
annotation not available
  
 0.949
CCT3
Chaperonin containing TCP1 subunit 3.
  
 0.949
PEX7
Peroxisomal biogenesis factor 7.
    
   0.935
TCP1
T-complex 1.
  
 0.893
ENSSARP00000012560
annotation not available
    
   0.889
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
   0.885
MPPED2
Metallophosphoesterase domain containing 2.
    
   0.879
KLHDC8B
Kelch domain containing 8B.
    
   0.848
CCT6B
Chaperonin containing TCP1 subunit 6B.
  
 0.837
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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