Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001879annotation not available (525 aa)    
Predicted Functional Partners:
PGBD1
piggyBac transposable element derived 1.
    
 
 0.948
ZNF483
Zinc finger protein 483.
    
 
 0.903
ENSSARP00000006394
annotation not available
    
   0.847
ZNF446
Zinc finger protein 446.
    
   0.831
ENSSARP00000004647
annotation not available
    
   0.789
GTF3C2
General transcription factor IIIC subunit 2.
    
 
 0.720
ENSSARP00000006173
annotation not available
    
  0.644
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.611
ENSSARP00000001458
annotation not available
    
 0.608
CLPTM1
CLPTM1 regulator of GABA type A receptor forward trafficking.
      
 0.603
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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