STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001883annotation not available (843 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
   
 0.906
ENSSARP00000000099
annotation not available
    
 0.872
SKP1
S-phase kinase associated protein 1.
    
 0.872
ENSSARP00000010763
annotation not available
    
 0.872
ENSSARP00000012192
annotation not available
    
 0.872
RBX1
Ring-box 1.
    
 0.843
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.803
FBXO25
F-box protein 25.
     
 0.797
UBA3
Ubiquitin like modifier activating enzyme 3.
    
 0.787
CAND1
Cullin associated and neddylation dissociated 1.
   
 
 0.766
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.