STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A33Solute carrier family 25 member 33. (302 aa)    
Predicted Functional Partners:
ENSSARP00000000682
annotation not available
     
  0.661
TTR
Transthyretin.
  
 
 0.641
ORMDL1
ORMDL sphingolipid biosynthesis regulator 1.
   
 
  0.632
PUM1
Pumilio RNA binding family member 1.
    
   0.630
PUM2
Pumilio RNA binding family member 2.
    
   0.630
SLC25A28
Solute carrier family 25 member 28.
    
 
 0.629
SACM1L
SAC1 like phosphatidylinositide phosphatase.
     
  0.628
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
     
  0.612
DPYSL3
Dihydropyrimidinase like 3.
  
 
 0.599
DPYSL5
Dihydropyrimidinase like 5.
  
 
 0.599
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.