STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101546584Histone H4-like. (103 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
    
 0.876
ARID4B
AT-rich interaction domain 4B.
    
 0.876
GLYR1
Glyoxylate reductase 1 homolog.
    
 
 0.792
H2AZ2
Histone H2A.V.
   
 0.787
HAT1
Histone acetyltransferase 1.
    
 0.782
KAT2B
Lysine acetyltransferase 2B.
    
 0.765
KMT5B
Lysine methyltransferase 5B.
    
 0.747
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.746
ENSSARP00000012652
annotation not available
    
 0.744
SIRT1
Sirtuin 1.
   
 0.738
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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