STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCC3Transmembrane and coiled-coil domain family 3. (343 aa)    
Predicted Functional Partners:
ERMN
Ermin.
      
 0.667
TSPAN15
Tetraspanin 15.
      
 0.665
ENSSARP00000004955
annotation not available
      
 0.592
TMTC2
Transmembrane O-mannosyltransferase targeting cadherins 2.
      
 0.577
TMCC1
Transmembrane and coiled-coil domain family 1.
  
 
 
0.572
PCDH17
Protocadherin 17.
      
 0.552
TSPAN2
Tetraspanin 2.
   
  
 0.549
ELOVL1
ELOVL fatty acid elongase 1.
      
 0.538
ENSSARP00000000637
annotation not available
      
 0.534
ENSSARP00000000643
annotation not available
      
 0.534
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.