Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATP5PBATP synthase peripheral stalk-membrane subunit b. (256 aa)    
Predicted Functional Partners:
ATP5PF
ATP synthase peripheral stalk subunit F6.
   
 0.999
ATP5MC2
ATP synthase membrane subunit c locus 2.
   
 0.999
ENSSARP00000005922
annotation not available
   
 0.999
ATP5MC3
ATP synthase membrane subunit c locus 3.
   
 0.999
ATP5F1B
ATP synthase F1 subunit beta.
   
 0.999
ENSSARP00000008987
annotation not available
   
 0.999
ENSSARP00000009005
annotation not available
   
 0.999
ENSSARP00000009141
annotation not available
   
 0.999
ENSSARP00000010143
annotation not available
   
 0.999
ENSSARP00000010896
annotation not available
   
 0.999
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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