STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD19Potassium channel tetramerization domain containing 19. (799 aa)    
Predicted Functional Partners:
ENSSARP00000011056
annotation not available
   
 0.996
WDR12
WD repeat domain 12.
   
 0.995
ENSSARP00000003091
annotation not available
   
 0.993
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.992
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.992
MRTO4
MRT4 homolog, ribosome maturation factor.
  
 0.992
BRIX1
Biogenesis of ribosomes BRX1.
   
 0.991
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
 0.990
RPF1
Ribosome production factor 1 homolog.
   
 0.990
NOP58
NOP58 ribonucleoprotein.
  
 0.990
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.