ENSSARP00000001922 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSSARP00000001922

annotation not available (255 aa)

Predicted Functional Partners:

NOL6

0.996

ENSSARP00000008116

0.994

IMP3

0.994

UTP6

0.994

ENSSARP00000002257

0.993

KRR1

0.991

UTP4

0.990

UTP18

0.990

ENSSARP00000009917

0.990

ENSSARP00000002658

0.989

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001922	ENSSARP00000002257	ENSSARP00000001922	ENSSARP00000002257	annotation not available	annotation not available	0.993
ENSSARP00000001922	ENSSARP00000002658	ENSSARP00000001922	ENSSARP00000002658	annotation not available	annotation not available	0.989
ENSSARP00000001922	ENSSARP00000008116	ENSSARP00000001922	ENSSARP00000008116	annotation not available	annotation not available	0.994
ENSSARP00000001922	ENSSARP00000009917	ENSSARP00000001922	ENSSARP00000009917	annotation not available	annotation not available	0.990
ENSSARP00000001922	IMP3	ENSSARP00000001922	ENSSARP00000008715	annotation not available	IMP U3 small nucleolar ribonucleoprotein 3.	0.994
ENSSARP00000001922	KRR1	ENSSARP00000001922	ENSSARP00000009027	annotation not available	KRR1 small subunit processome component homolog.	0.991
ENSSARP00000001922	NOL6	ENSSARP00000001922	ENSSARP00000009419	annotation not available	Nucleolar protein 6.	0.996
ENSSARP00000001922	UTP18	ENSSARP00000001922	ENSSARP00000006855	annotation not available	UTP18 small subunit processome component.	0.990
ENSSARP00000001922	UTP4	ENSSARP00000001922	ENSSARP00000003292	annotation not available	UTP4 small subunit processome component.	0.990
ENSSARP00000001922	UTP6	ENSSARP00000001922	ENSSARP00000009736	annotation not available	UTP6 small subunit processome component.	0.994
ENSSARP00000002257	ENSSARP00000001922	ENSSARP00000002257	ENSSARP00000001922	annotation not available	annotation not available	0.993
ENSSARP00000002257	ENSSARP00000002658	ENSSARP00000002257	ENSSARP00000002658	annotation not available	annotation not available	0.996
ENSSARP00000002257	ENSSARP00000008116	ENSSARP00000002257	ENSSARP00000008116	annotation not available	annotation not available	0.999
ENSSARP00000002257	ENSSARP00000009917	ENSSARP00000002257	ENSSARP00000009917	annotation not available	annotation not available	0.998
ENSSARP00000002257	IMP3	ENSSARP00000002257	ENSSARP00000008715	annotation not available	IMP U3 small nucleolar ribonucleoprotein 3.	0.999
ENSSARP00000002257	KRR1	ENSSARP00000002257	ENSSARP00000009027	annotation not available	KRR1 small subunit processome component homolog.	0.995
ENSSARP00000002257	NOL6	ENSSARP00000002257	ENSSARP00000009419	annotation not available	Nucleolar protein 6.	0.998
ENSSARP00000002257	UTP18	ENSSARP00000002257	ENSSARP00000006855	annotation not available	UTP18 small subunit processome component.	0.998
ENSSARP00000002257	UTP4	ENSSARP00000002257	ENSSARP00000003292	annotation not available	UTP4 small subunit processome component.	0.998
ENSSARP00000002257	UTP6	ENSSARP00000002257	ENSSARP00000009736	annotation not available	UTP6 small subunit processome component.	0.999