Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LYARLy1 antibody reactive. (375 aa)    
Predicted Functional Partners:
ENSSARP00000002859
annotation not available
   
 
 0.979
ENSSARP00000007784
annotation not available
   
 
 0.957
RPF2
Ribosome production factor 2 homolog.
   
   0.951
PRKRA
Protein activator of interferon induced protein kinase EIF2AK2.
    
 
 0.948
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.905
RRS1
Ribosome biogenesis regulator 1 homolog.
   
 
 0.903
TARBP2
TARBP2 subunit of RISC loading complex.
    
 
 0.900
NEXN
Nexilin F-actin binding protein.
   
    0.893
RPS15
Ribosomal protein S15.
    
   0.892
KRR1
KRR1 small subunit processome component homolog.
   
 
 0.892
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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