STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRR1Leucine rich repeat protein 1. (407 aa)    
Predicted Functional Partners:
CUL2
Cullin 2.
    
 0.993
RBX1
Ring-box 1.
    
 0.988
ENSSARP00000005386
annotation not available
    
 0.978
COPS5
COP9 signalosome subunit 5.
    
  0.967
COPS2
COP9 signalosome subunit 2.
    
  0.967
COPS3
COP9 signalosome subunit 3.
    
 0.964
ENSSARP00000001441
annotation not available
    
  0.958
MCM3
Minichromosome maintenance complex component 3.
   
 
 0.924
GPS1
G protein pathway suppressor 1.
    
  0.920
WDHD1
WD repeat and HMG-box DNA binding protein 1.
   
 
 0.918
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.