STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHKBP1SH3KBP1 binding protein 1. (695 aa)    
Predicted Functional Partners:
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.752
PACRGL
Parkin coregulated like.
      
 0.718
BTBD10
BTB domain containing 10.
      
 0.700
KCTD1
Potassium channel tetramerization domain containing 1.
    
 
 0.624
LRRC23
Leucine rich repeat containing 23.
    
 
 0.619
KCTD3
Potassium channel tetramerization domain containing 3.
  
 
  
0.597
TTBK2
Tau tubulin kinase 2.
      
 0.540
ENSSARP00000002108
annotation not available
      
 0.537
ENSSARP00000007496
annotation not available
      
 0.537
TBC1D12
TBC1 domain family member 12.
      
 0.533
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.