Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001955annotation not available (407 aa)    
Predicted Functional Partners:
ENSSARP00000008312
annotation not available
   
 0.953
GABRA5
Gamma-aminobutyric acid type A receptor alpha5 subunit.
   
  0.945
GABRA4
Gamma-aminobutyric acid type A receptor alpha4 subunit.
   
  0.944
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit.
   
 0.944
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit.
   
 0.943
ENSSARP00000011783
annotation not available
     
  0.915
GABRB1
Gamma-aminobutyric acid type A receptor beta1 subunit.
     
  0.874
GABRR2
Gamma-aminobutyric acid type A receptor rho2 subunit.
     
  0.853
ENSSARP00000009949
annotation not available
     
  0.853
GABRB2
Gamma-aminobutyric acid type A receptor beta2 subunit.
     
  0.852
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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