STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF3PHD finger protein 3. (2035 aa)    
Predicted Functional Partners:
ENSSARP00000005370
annotation not available
    
 0.952
NIPBL
NIPBL cohesin loading factor.
   
  
 0.901
ENSSARP00000001412
annotation not available
    
  0.861
POLR2I
RNA polymerase II subunit I.
    
 0.846
CHD9
Chromodomain helicase DNA binding protein 9.
   
 0.838
POLR2B
RNA polymerase II subunit B.
   
 0.831
ENSSARP00000010342
annotation not available
    
 0.825
ENSSARP00000001402
annotation not available
    
  0.822
POLR2H
RNA polymerase II subunit H.
    
  0.822
POLR2L
RNA polymerase II subunit L.
    
  0.822
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.