GRIK1 protein (Sorex araneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

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[Homology]

Score

GRIK1

Glutamate ionotropic receptor kainate type subunit 1. (831 aa)

Predicted Functional Partners:

DLG3

0.933

GRIK2

0.909

GRIN2B

0.901

ENSSARP00000002127

0.899

ENSSARP00000001882

0.897

ENSSARP00000001903

0.890

ENSSARP00000002827

0.883

ENSSARP00000009665

0.883

GRIN3A

0.878

GRIA2

0.876

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLG3	ENSSARP00000001882	ENSSARP00000004906	ENSSARP00000001882	Discs large MAGUK scaffold protein 3.	annotation not available	0.972
DLG3	ENSSARP00000001903	ENSSARP00000004906	ENSSARP00000001903	Discs large MAGUK scaffold protein 3.	annotation not available	0.991
DLG3	ENSSARP00000002127	ENSSARP00000004906	ENSSARP00000002127	Discs large MAGUK scaffold protein 3.	annotation not available	0.932
DLG3	ENSSARP00000002827	ENSSARP00000004906	ENSSARP00000002827	Discs large MAGUK scaffold protein 3.	annotation not available	0.546
DLG3	ENSSARP00000009665	ENSSARP00000004906	ENSSARP00000009665	Discs large MAGUK scaffold protein 3.	annotation not available	0.546
DLG3	GRIA2	ENSSARP00000004906	ENSSARP00000001010	Discs large MAGUK scaffold protein 3.	Glutamate ionotropic receptor AMPA type subunit 2.	0.981
DLG3	GRIK1	ENSSARP00000004906	ENSSARP00000001958	Discs large MAGUK scaffold protein 3.	Glutamate ionotropic receptor kainate type subunit 1.	0.933
DLG3	GRIK2	ENSSARP00000004906	ENSSARP00000001061	Discs large MAGUK scaffold protein 3.	Glutamate ionotropic receptor kainate type subunit 2.	0.933
DLG3	GRIN2B	ENSSARP00000004906	ENSSARP00000011814	Discs large MAGUK scaffold protein 3.	Glutamate ionotropic receptor NMDA type subunit 2B.	0.997
DLG3	GRIN3A	ENSSARP00000004906	ENSSARP00000010878	Discs large MAGUK scaffold protein 3.	Glutamate ionotropic receptor NMDA type subunit 3A.	0.954
ENSSARP00000001882	DLG3	ENSSARP00000001882	ENSSARP00000004906	annotation not available	Discs large MAGUK scaffold protein 3.	0.972
ENSSARP00000001882	ENSSARP00000001903	ENSSARP00000001882	ENSSARP00000001903	annotation not available	annotation not available	0.999
ENSSARP00000001882	ENSSARP00000002127	ENSSARP00000001882	ENSSARP00000002127	annotation not available	annotation not available	0.932
ENSSARP00000001882	GRIA2	ENSSARP00000001882	ENSSARP00000001010	annotation not available	Glutamate ionotropic receptor AMPA type subunit 2.	0.923
ENSSARP00000001882	GRIK1	ENSSARP00000001882	ENSSARP00000001958	annotation not available	Glutamate ionotropic receptor kainate type subunit 1.	0.897
ENSSARP00000001882	GRIK2	ENSSARP00000001882	ENSSARP00000001061	annotation not available	Glutamate ionotropic receptor kainate type subunit 2.	0.897
ENSSARP00000001882	GRIN2B	ENSSARP00000001882	ENSSARP00000011814	annotation not available	Glutamate ionotropic receptor NMDA type subunit 2B.	0.966
ENSSARP00000001882	GRIN3A	ENSSARP00000001882	ENSSARP00000010878	annotation not available	Glutamate ionotropic receptor NMDA type subunit 3A.	0.997
ENSSARP00000001903	DLG3	ENSSARP00000001903	ENSSARP00000004906	annotation not available	Discs large MAGUK scaffold protein 3.	0.991
ENSSARP00000001903	ENSSARP00000001882	ENSSARP00000001903	ENSSARP00000001882	annotation not available	annotation not available	0.999