STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOLGB1Golgin B1. (3220 aa)    
Predicted Functional Partners:
GOSR1
Golgi SNAP receptor complex member 1.
   
 0.964
STX5
Syntaxin 5.
    
 0.961
USO1
USO1 vesicle transport factor.
   
 0.954
ACBD3
acyl-CoA binding domain containing 3.
    
 0.868
ACTR2
Actin related protein 2.
   
 0.860
ACTR3
Actin related protein 3.
   
 0.844
TJP1
Tight junction protein 1.
    
 0.828
ENSSARP00000012235
annotation not available
    
 0.812
YES1
YES proto-oncogene 1, Src family tyrosine kinase.
   
 0.807
WAS
WASP actin nucleation promoting factor.
   
 0.779
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.