STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNPO1Transportin 1. (889 aa)    
Predicted Functional Partners:
ENSSARP00000009308
annotation not available
    
 0.960
ENSSARP00000003637
annotation not available
   
 0.951
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.933
BAP1
BRCA1 associated protein 1.
    
 
 0.904
IPO4
Importin 4.
   
 
 0.869
ADGRB3
Adhesion G protein-coupled receptor B3.
   
 0.866
IPO7
Importin 7.
   
 
 0.856
ENSSARP00000012841
annotation not available
    
 
 0.852
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
    
 
 0.829
NUP98
Nucleoporin 98.
   
 0.828
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.