Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNPO1Transportin 1. (889 aa)    
Predicted Functional Partners:
TNPO2
Transportin 2.
  
 
0.999
IPO7
Importin 7.
   
 0.993
TNPO3
Transportin 3.
   
 0.981
NUP153
Nucleoporin 153.
   
 
 0.970
IPO11
Importin 11.
   
 
 0.962
IPO13
Importin 13.
   
 
 0.960
IPO5
Importin 5.
   
 
 0.958
KPNB1
Karyopherin subunit beta 1.
   
 0.956
IPO9
Importin 9.
   
 
 0.946
BAP1
BRCA1 associated protein 1.
   
   0.936
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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