STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001977annotation not available (329 aa)    
Predicted Functional Partners:
ENSSARP00000005828
annotation not available
     
 0.958
UBE3D
Ubiquitin protein ligase E3D.
    
   0.944
RPAP3
RNA polymerase II associated protein 3.
     
 0.937
RUVBL2
RuvB like AAA ATPase 2.
   
 
 0.934
CCDC47
Coiled-coil domain containing 47.
   
 
  0.925
ENSSARP00000011315
annotation not available
   
 
  0.924
PIH1D2
PIH1 domain containing 2.
     
 0.922
ENSSARP00000002031
annotation not available
     
  0.920
CCT3
Chaperonin containing TCP1 subunit 3.
     
  0.920
CCT7
Chaperonin containing TCP1 subunit 7.
     
  0.919
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.