Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC41A1Solute carrier family 41 member 1. (514 aa)    
Predicted Functional Partners:
SLC41A2
Solute carrier family 41 member 2.
   
 
  0.923
NUCKS1
Nuclear casein kinase and cyclin dependent kinase substrate 1.
 
    
 0.717
ENSSARP00000001975
annotation not available
      
 0.686
PM20D1
Peptidase M20 domain containing 1.
      
 0.686
CLDN16
Claudin 16.
      
 0.620
TRPM6
Transient receptor potential cation channel subfamily M member 6.
      
 0.618
MMGT1
Membrane magnesium transporter 1.
      
 0.617
MRS2
Magnesium transporter MRS2.
      
 0.601
LYPD3
LY6/PLAUR domain containing 3.
    
   0.588
NIPA1
NIPA magnesium transporter 1.
      
 0.576
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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