STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2J1Ubiquitin conjugating enzyme E2 J1. (307 aa)    
Predicted Functional Partners:
ENSSARP00000007617
annotation not available
    
 0.995
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.917
ENSSARP00000002264
annotation not available
    
 0.906
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.880
ENSSARP00000006326
annotation not available
    
 0.874
UBA3
Ubiquitin like modifier activating enzyme 3.
   
 0.859
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.856
ENSSARP00000009013
annotation not available
     
 0.855
UBE2H
Ubiquitin conjugating enzyme E2 H.
   
 0.848
AMFR
Autocrine motility factor receptor.
    
 
 0.848
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.