Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000002013annotation not available (396 aa)    
Predicted Functional Partners:
FKBP8
FKBP prolyl isomerase 8.
      
 0.751
PLN
Phospholamban.
    
   0.742
BCL2L14
BCL2 like 14.
    
 
 0.736
ENSSARP00000011294
annotation not available
   
  
 0.680
AMBRA1
Autophagy and beclin 1 regulator 1.
      
 0.642
CALCOCO2
Calcium binding and coiled-coil domain 2.
      
 0.629
TAX1BP1
Tax1 binding protein 1.
      
 0.621
LYPD6
LY6/PLAUR domain containing 6.
      
 0.618
FUNDC1
FUN14 domain-containing protein 1-like.
      
 0.616
BNIP3L
BCL2 interacting protein 3 like.
    
 
 0.613
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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