STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUT11Fucosyltransferase 11. (406 aa)    
Predicted Functional Partners:
FUT1
Fucosyltransferase 1 (H blood group).
      
 0.617
CHST14
Carbohydrate sulfotransferase 14.
    
 
 0.605
ENSSARP00000009073
annotation not available
     
  0.590
WDR77
WD repeat domain 77.
   
 
  0.588
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
     
 0.583
ENSSARP00000000843
annotation not available
      
 0.579
ENSSARP00000009876
annotation not available
     
  0.574
PRMT5
Protein arginine methyltransferase 5.
     
  0.574
CLNS1A
Chloride nucleotide-sensitive channel 1A.
     
  0.573
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
     
  0.568
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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