STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD3THUMP domain containing 3. (505 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
 0.928
ENSSARP00000000188
annotation not available
    
 0.835
SETD5
SET domain containing 5.
      
 0.754
ENSSARP00000003397
annotation not available
    
 0.714
WAS
WASP actin nucleation promoting factor.
   
 0.683
WASL
WASP like actin nucleation promoting factor.
   
 0.683
METTL5
Methyltransferase like 5.
   
 
 0.634
PUS10
Pseudouridine synthase 10.
      
 0.565
ENSSARP00000010091
annotation not available
    
 
 0.556
ENSSARP00000004616
annotation not available
      
 0.538
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.