GNL3 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

GNL3

G protein nucleolar 3. (535 aa)

Predicted Functional Partners:

GNL2

0.999

EBNA1BP2

0.997

NIFK

0.995

ENSSARP00000003091

0.994

NOC2L

0.993

RPF2

0.993

MRTO4

0.993

DDX18

0.992

ENSSARP00000011056

0.992

ENSSARP00000002859

0.991

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX18	EBNA1BP2	ENSSARP00000004749	ENSSARP00000012095	DEAD-box helicase 18.	EBNA1 binding protein 2.	0.997
DDX18	ENSSARP00000002859	ENSSARP00000004749	ENSSARP00000002859	DEAD-box helicase 18.	annotation not available	0.992
DDX18	ENSSARP00000003091	ENSSARP00000004749	ENSSARP00000003091	DEAD-box helicase 18.	annotation not available	0.997
DDX18	ENSSARP00000011056	ENSSARP00000004749	ENSSARP00000011056	DEAD-box helicase 18.	annotation not available	0.998
DDX18	GNL2	ENSSARP00000004749	ENSSARP00000010280	DEAD-box helicase 18.	G protein nucleolar 2.	0.996
DDX18	GNL3	ENSSARP00000004749	ENSSARP00000002018	DEAD-box helicase 18.	G protein nucleolar 3.	0.992
DDX18	MRTO4	ENSSARP00000004749	ENSSARP00000011473	DEAD-box helicase 18.	MRT4 homolog, ribosome maturation factor.	0.997
DDX18	NIFK	ENSSARP00000004749	ENSSARP00000005656	DEAD-box helicase 18.	Nucleolar protein interacting with the FHA domain of MKI67.	0.997
DDX18	NOC2L	ENSSARP00000004749	ENSSARP00000005940	DEAD-box helicase 18.	NOC2 like nucleolar associated transcriptional repressor.	0.996
DDX18	RPF2	ENSSARP00000004749	ENSSARP00000010893	DEAD-box helicase 18.	Ribosome production factor 2 homolog.	0.997
EBNA1BP2	DDX18	ENSSARP00000012095	ENSSARP00000004749	EBNA1 binding protein 2.	DEAD-box helicase 18.	0.997
EBNA1BP2	ENSSARP00000002859	ENSSARP00000012095	ENSSARP00000002859	EBNA1 binding protein 2.	annotation not available	0.996
EBNA1BP2	ENSSARP00000003091	ENSSARP00000012095	ENSSARP00000003091	EBNA1 binding protein 2.	annotation not available	0.997
EBNA1BP2	ENSSARP00000011056	ENSSARP00000012095	ENSSARP00000011056	EBNA1 binding protein 2.	annotation not available	0.998
EBNA1BP2	GNL2	ENSSARP00000012095	ENSSARP00000010280	EBNA1 binding protein 2.	G protein nucleolar 2.	0.988
EBNA1BP2	GNL3	ENSSARP00000012095	ENSSARP00000002018	EBNA1 binding protein 2.	G protein nucleolar 3.	0.997
EBNA1BP2	MRTO4	ENSSARP00000012095	ENSSARP00000011473	EBNA1 binding protein 2.	MRT4 homolog, ribosome maturation factor.	0.998
EBNA1BP2	NIFK	ENSSARP00000012095	ENSSARP00000005656	EBNA1 binding protein 2.	Nucleolar protein interacting with the FHA domain of MKI67.	0.998
EBNA1BP2	NOC2L	ENSSARP00000012095	ENSSARP00000005940	EBNA1 binding protein 2.	NOC2 like nucleolar associated transcriptional repressor.	0.999
EBNA1BP2	RPF2	ENSSARP00000012095	ENSSARP00000010893	EBNA1 binding protein 2.	Ribosome production factor 2 homolog.	0.998